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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4f3lA_

Fold library idPDB HeaderMoleculeTitle
c4f3lA_PDB header: transcription/activatorChain: A: PDB Molecule: circadian locomoter output cycles protein kaput;PDBTitle: crystal structure of the heterodimeric clock:bmal1 transcriptional2 activator complex


Added to library: Sat Jun 9 12:20:55 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFT
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Known secondary structure (DSSP)
T

SSS



TS
S
GGGTS

S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSLT
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Known secondary structure (DSSP) TTTTSB
TT


TTSBGGGGS
GGG





SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLTRVCFVATVRLATPQFIKEMCTVEEPNEE
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Known secondary structure (DSSP)
GGG
GGG


S
SSS





SS

SS
S
SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKG
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Known secondary structure (DSSP)
TTSB
TTS


TTSBGGGGB
S



TT
 .........290.........300.........310.........
Sequence QQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAE
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Known secondary structure (DSSP) S
TTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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