Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4f3jA_

Fold library idPDB HeaderMoleculeTitle
c4f3jA_PDB header: signaling proteinChain: A: PDB Molecule: complement c1q tumor necrosis factor-related protein 5;PDBTitle: crystal structure of trimeric gc1q domain of human c1qtnf5 associated2 with late-onset retinal macular degeneration


Added to library: Wed Jan 9 14:56:37 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKN
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)






SS



SS





TT

TTTT

S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSPV
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) T


S
SS

TT


STT

BTTB

S

SSTT
 ...
Sequence FAH
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D