PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4f2nL_

Fold library id	PDB Header	Molecule	Title
c4f2nL_	PDB header: oxidoreductase	Chain: L: PDB Molecule: superoxide dismutase;	PDBTitle: crystal structure of iron superoxide dismutase from leishmania major

Links to external resources
Added to library: Sat May 19 11:46:44 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence C Y H T L P H L R Y P A E L P T L G F N Y K D G I Q P V M S P R Q L E L H Y S K H H S A Y V D K L N T L G K G Y E G K T I E E I I L A T T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
B S S
S S
G G G
B T T T B
T T T
T T
T T S B T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N E S K V M F N Q A A Q H F N H S F F W K C L S P G G K P M P K T L E N A I A K Q F G S V D D F M V S F Q Q A G V N N F G S G W T W L C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T B
T T
B
S S T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .

Sequence D P Q T K E L L I D S T S N A G C P L T S G L R P I F T A D V W E H A Y Y K D F E N R R A D Y L K E L W Q I V D W E F V C H M Y E R A T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T
G G G G T
S G G G T T T
G G G B B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	C	Y	H	T	L	P	H	L	R	Y	P	A	E	L	P	T	L	G	F	N	Y	K	D	G	I	Q	P	V	M	S	P	R	Q	L	E	L	H	Y	S	K	H	H	S	A	Y	V	D	K	L	N	T	L	G	K	G	Y	E	G	K	T	I	E	E	I	I	L	A	T	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T		B	S	S							S	S		G	G	G		B	T	T	T	B											T											T	T		T	T		T	T	S	B									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	E	S	K	V	M	F	N	Q	A	A	Q	H	F	N	H	S	F	F	W	K	C	L	S	P	G	G	K	P	M	P	K	T	L	E	N	A	I	A	K	Q	F	G	S	V	D	D	F	M	V	S	F	Q	Q	A	G	V	N	N	F	G	S	G	W	T	W	L	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																			T	B		T	T		B															S	S														T	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Sequence	D	P	Q	T	K	E	L	L	I	D	S	T	S	N	A	G	C	P	L	T	S	G	L	R	P	I	F	T	A	D	V	W	E	H	A	Y	Y	K	D	F	E	N	R	R	A	D	Y	L	K	E	L	W	Q	I	V	D	W	E	F	V	C	H	M	Y	E	R	A	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T									T	T			G	G	G	G	T										S	G	G	G	T					T	T										G	G	G	B	B