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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4f1iA_

Fold library idPDB HeaderMoleculeTitle
c4f1iA_PDB header: hydrolaseChain: A: PDB Molecule: 5'-tyrosyl-dna phosphodiesterase;PDBTitle: crystal structure of semet tdp2 from caenorhabditis elegans


Added to library: Sat Nov 3 15:33:11 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EDSEVEIEILDEPEQGKLSXSDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSEAFAEARSA
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Known secondary structure (DSSP)

S





TTS
S






T

TTTTT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVXGVXTAEDLKGFEVSVXSWNIDGLDGRSLLTRXKAVAHIVKNVNPDILFLQEVVDRDLAPIDKLQSLY
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Known secondary structure (DSSP)



TT


TT

TT

S
STT
GGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KIYYSNKGCQYYTAILVSKXFDVEKHDVIHFQNSGXYRTLQILEGSIGGLKVFLLNTHLESTREHRPQRC
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Known secondary structure (DSSP) S
TTSSSTT
TT
SS

TT


SGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence AQFGFCXDKVREIIAQNPGALVFFGGDLNLRDEEVSRVPDGVKDAWEAAGSDNKTKFTWDTFKNDNKQGF
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Known secondary structure (DSSP) STT




GGG




TT
TT

GGG

STTT
TTS

S
 .........290.........300.........310.........320........
Sequence HGAKXRFDRLYWSGPLDKVKFTLEGRQRIRSCLCFPSDHWAINATFFA
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Known secondary structure (DSSP) S



SS



S

TTTSS
S
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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