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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ezhA_

Fold library idPDB HeaderMoleculeTitle
c4ezhA_PDB header: oxidoreductaseChain: A: PDB Molecule: lysine-specific demethylase 6b;PDBTitle: the crystal structure of kdm6b bound with h3k27me3 peptide


Added to library: Wed Jan 9 16:45:50 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNL
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Known secondary structure (DSSP)

SS
GGG







SS


S




SSSSGGG

TT

TTT

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEL
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Known secondary structure (DSSP) GGGS
SSS


TT

B
TTSS
B
SB


TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVLFQHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRT
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Known secondary structure (DSSP) TTTT




TTTTGGGS
GGGSSS
TTBGGGGSSS

TTTTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQR
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Known secondary structure (DSSP)

GGG
S

GGGTT

TTTS
B


TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence PGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKI
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Known secondary structure (DSSP) TT

TT
SSS
BS
TT


SS


B
 .........360.........370.........380.........390.........400.........410.........420
Sequence SDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSTYLVHCE
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Known secondary structure (DSSP)

TT






TT



TTT


S



 .........430.........440.........450.....
Sequence GCARRRSAGLQGVVVLEQYRTEELAQAYDAFTLAP
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Known secondary structure (DSSP) TTSTT
TT
SS


B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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