PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4evrA_

Fold library id	PDB Header	Molecule	Title
c4evrA_	PDB header: transport protein	Chain: A: PDB Molecule: putative abc transporter subunit, substrate-binding	PDBTitle: crystal structure of abc transporter from r. palustris - solute2 binding protein (rpa0668) in complex with benzoate

Links to external resources
Added to library: Sat May 26 12:25:41 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G A L K V G L L L P Y S G T Y A P L G E A I T R G L E L Y V Q S Q G G K L G G R S I S F V K V D D E S A P P K A T E L T T K L I Q S E K A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T T T T T T
T T
T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L I G T V H S G V A X A X V K I A R E D G I P T I V P N A G A D I I T R A X C A P N V F R T S F A N G Q I G R A T G D A X I K A G L K K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
G G G G T T T
T T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V T V T W K Y A A G E E X V S G F K K S F T A G K G E V V K D I T I A F P D V E F Q S A L A E I A S L K P D C V Y A F F S G G G A L K F I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
T T
S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D Y A A A N L G I P L W G P G F L T D G V E A A A G P A G D G I K T V L H Y V S D L D N A E N Q A F V K S F E A A Y K I P P D V F A V Q G W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T T T T G G G G T T
S
T T
S S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D A G Q L L D A G V K A V G G D V A K R K E L N A A X A A A S F A S P R G P F K L S A A H N P V Q N F Y L R E L K G G K S V N L G L A A P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
T
T T
B
T T S
B
T T

. . . . . . . . . 360

Sequence V A D E A I G C K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	A	L	K	V	G	L	L	L	P	Y	S	G	T	Y	A	P	L	G	E	A	I	T	R	G	L	E	L	Y	V	Q	S	Q	G	G	K	L	G	G	R	S	I	S	F	V	K	V	D	D	E	S	A	P	P	K	A	T	E	L	T	T	K	L	I	Q	S	E	K	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	T	T																		T	T	T			T	T											T	T															T	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	I	G	T	V	H	S	G	V	A	X	A	X	V	K	I	A	R	E	D	G	I	P	T	I	V	P	N	A	G	A	D	I	I	T	R	A	X	C	A	P	N	V	F	R	T	S	F	A	N	G	Q	I	G	R	A	T	G	D	A	X	I	K	A	G	L	K	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																					S	S				G	G	G	G	T	T	T			T	T				S	S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	T	V	T	W	K	Y	A	A	G	E	E	X	V	S	G	F	K	K	S	F	T	A	G	K	G	E	V	V	K	D	I	T	I	A	F	P	D	V	E	F	Q	S	A	L	A	E	I	A	S	L	K	P	D	C	V	Y	A	F	F	S	G	G	G	A	L	K	F	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																	T	T											T	T																	S								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	Y	A	A	A	N	L	G	I	P	L	W	G	P	G	F	L	T	D	G	V	E	A	A	A	G	P	A	G	D	G	I	K	T	V	L	H	Y	V	S	D	L	D	N	A	E	N	Q	A	F	V	K	S	F	E	A	A	Y	K	I	P	P	D	V	F	A	V	Q	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T									G	G	G	T	T	T	T					G	G	G	G	T	T						S			T	T			S															S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	A	G	Q	L	L	D	A	G	V	K	A	V	G	G	D	V	A	K	R	K	E	L	N	A	A	X	A	A	A	S	F	A	S	P	R	G	P	F	K	L	S	A	A	H	N	P	V	Q	N	F	Y	L	R	E	L	K	G	G	K	S	V	N	L	G	L	A	A	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T		T	T											T						T	T					B		T	T	S		B											T	T
	.	.	.	.	.	.	.	.	.	360
Sequence	V	A	D	E	A	I	G	C	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T