Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4eqfA_

Fold library idPDB HeaderMoleculeTitle
c4eqfA_PDB header: protein binding/transport proteinChain: A: PDB Molecule: pex5-related protein;PDBTitle: trip8b-1a#206-567 interacting with the carboxy-terminal seven residues2 of hcn2


Added to library: Sat Jun 2 12:37:06 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GYYFHTENPFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVAL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)




SS
TTTT
TTT

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLDSSVLEGVKELYLEAAHQNGDMI
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)
TT
TT





S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFI
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)
T

TT
TT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSRYNLGISCINLGAYREAVSNFLTALSLQRKSGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNL
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) T




T
TT

GGGTTTTT
 .
Sequence D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D