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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4eqbA_

Fold library idPDB HeaderMoleculeTitle
c4eqbA_PDB header: transport proteinChain: A: PDB Molecule: spermidine/putrescine abc superfamily atp binding cassettePDBTitle: 1.5 angstrom crystal structure of spermidine/putrescine abc2 transporter substrate-binding protein from streptococcus pneumoniae3 strain canada mdr_19a in complex with calcium and hepes.


Added to library: Sat May 5 12:06:57 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQKLVIYNWGDYIDPELLTQFTEETGIQVQYETFDSNEAMYTKIKQGGTTYDIAIPSEYMINKMKDEDLL
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Known secondary structure (DSSP)

TT
S


SS

S

S

BTT
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPLDYSKIEGIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLFD
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Known secondary structure (DSSP)



GGG


GGGB
GGGSS
TTSGGGSS
GGG
SS


SGGGGG
GGGTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GAREVLGLGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEASQML
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Known secondary structure (DSSP)
TT

TT


TTGGGSTTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPENALQNAEYVGYSTPNLPAKELLPEE
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Known secondary structure (DSSP)
TT

TT
B
BTT
S
S

B
SBTS
 .........290.........300.........310.........320...
Sequence TKEDKAFYPDVETMKHLEVYEKFDHKWTGKYSDLFLQFKMYRK
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Known secondary structure (DSSP) T
TTTS

T





T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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