PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4eq9A_

Fold library id	PDB Header	Molecule	Title
c4eq9A_	PDB header: transport protein	Chain: A: PDB Molecule: abc transporter substrate-binding protein-amino acid	PDBTitle: 1.4 angstrom crystal structure of putative abc transporter substrate-2 binding protein from streptococcus pneumoniae strain canada mdr_19a3 in complex with glutathione

Links to external resources
Added to library: Sat May 5 12:00:08 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K E I I V A T N G S P R P F I Y E E N G E L T G Y E I E V V R A I F K D S D K Y D V K F E K T E W S G V F A G L D A D R Y N M A V N N L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S T T S T T
S S
T T S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y T K E R A E K Y L Y A A P I A Q N P N V L V V K K D D S S I K S L D D I G G K S T E V V Q A T T S A K Q L E A Y N A E H T D N P T I L N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S G G G
T T
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T K A D F Q Q I M V R L S D G Q F D Y K I F D K I G V E T V I K N Q G L D N L K V I E L P S D Q Q P Y V Y P L L A Q G Q D E L K S F V D K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S T
T T
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence I K E L Y K D G T L E K L S K Q F F G D T Y L P A E A D I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	E	I	I	V	A	T	N	G	S	P	R	P	F	I	Y	E	E	N	G	E	L	T	G	Y	E	I	E	V	V	R	A	I	F	K	D	S	D	K	Y	D	V	K	F	E	K	T	E	W	S	G	V	F	A	G	L	D	A	D	R	Y	N	M	A	V	N	N	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T	T	S				T	T				S											T	T		S	S																			T	T	S		S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	T	K	E	R	A	E	K	Y	L	Y	A	A	P	I	A	Q	N	P	N	V	L	V	V	K	K	D	D	S	S	I	K	S	L	D	D	I	G	G	K	S	T	E	V	V	Q	A	T	T	S	A	K	Q	L	E	A	Y	N	A	E	H	T	D	N	P	T	I	L	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T			S		S	S	G	G	G		T	T							T	T															T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	K	A	D	F	Q	Q	I	M	V	R	L	S	D	G	Q	F	D	Y	K	I	F	D	K	I	G	V	E	T	V	I	K	N	Q	G	L	D	N	L	K	V	I	E	L	P	S	D	Q	Q	P	Y	V	Y	P	L	L	A	Q	G	Q	D	E	L	K	S	F	V	D	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S	S	S																	T		T	T									S	S										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	I	K	E	L	Y	K	D	G	T	L	E	K	L	S	K	Q	F	F	G	D	T	Y	L	P	A	E	A	D	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											S	S						G	G	G