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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4eq7B_

Fold library idPDB HeaderMoleculeTitle
c4eq7B_PDB header: transport proteinChain: B: PDB Molecule: abc transporter, substrate binding protein (polyamine);PDBTitle: structure of atu4243-gaba receptor


Added to library: Thu Jan 10 13:15:37 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDLVFSSWGGTTQDAQKAAWAEKFXVETGINVLQDGPTDYGKLKAXVEANGVTWDVVDVEGDYAAQAGPK
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Known secondary structure (DSSP)




T






TT



STTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLLEKLDFSVIDKTKLDPRFVTDYSVGSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAP
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Known secondary structure (DSSP) T
B



TTTS

TTB
GGG
BTTBGGGSSS


ST
TTTS
S

SSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVIEAALLADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRXTALEQS
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Known secondary structure (DSSP) TTT

GGG
SS

TTGGG
STTSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVKVETSWAQNITAADSLVVPKGTKNKDAAXKFIALATSAQAQADXATATGYAPVNIESAKLXDPKIAKS
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Known secondary structure (DSSP) T


BTT
S
TSS
B
SBTTSGGGS
TT
 .........290.........300.........310.........320
Sequence LPDQQTESQVNADXNYWAQHRDEIGERWYAWQAKHHHHHH
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Known secondary structure (DSSP) SGGG

S



SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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