PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4epzA_

Fold library id	PDB Header	Molecule	Title
c4epzA_	PDB header: transcription	Chain: A: PDB Molecule: transcription anti-terminator antagonist upxz;	PDBTitle: crystal structure of a transcription anti-terminator antagonist upxz2 (bacuni_04315) from bacteroides uniformis atcc 8492 at 1.68 a3 resolution

Links to external resources
Added to library: Sat Jul 14 13:20:58 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N S L L S R A L E L Q R X A H E L X Y L I Y S D E F C R L N K E V L T R S D S L F S E Q S S D I E E E G N L C L A L L X G Y N A T I Y D N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T
S S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D K E R K K Q V I L D R I Y N I X S Q L P A S L L K X R L L T W G Y S E T Y D E E L A H E A H Q L I E T W N I S D L T D E Q K E I I E E L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G S
S S
T S
G G G

. . . . . . . . . 150 . . . .

Sequence N F E E N Q Y P W E E V Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	S	L	L	S	R	A	L	E	L	Q	R	X	A	H	E	L	X	Y	L	I	Y	S	D	E	F	C	R	L	N	K	E	V	L	T	R	S	D	S	L	F	S	E	Q	S	S	D	I	E	E	E	G	N	L	C	L	A	L	L	X	G	Y	N	A	T	I	Y	D	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T																							T				S	S																			S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	K	E	R	K	K	Q	V	I	L	D	R	I	Y	N	I	X	S	Q	L	P	A	S	L	L	K	X	R	L	L	T	W	G	Y	S	E	T	Y	D	E	E	L	A	H	E	A	H	Q	L	I	E	T	W	N	I	S	D	L	T	D	E	Q	K	E	I	I	E	E	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	G	G	G	S		S	S																													T	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Sequence	N	F	E	E	N	Q	Y	P	W	E	E	V	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S		G	G	G	S