PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4embD_

Fold library id	PDB Header	Molecule	Title
c4embD_	PDB header: isomerase	Chain: D: PDB Molecule: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;	PDBTitle: crystal structure of a phosphoglycerate mutase gpma from borrelia2 burgdorferi b31

Links to external resources
Added to library: Sat Apr 28 13:33:37 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F X Y K L V L V R H G E S E W N K E N L F T G W T D V K L S D K G I D E A V E A G L L L K Q E G Y S F D I A F S S L L S R A N D T L N I I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T T T T
T T
B
T T
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R E L G Q S Y I S V K K T W R L N E R H Y G A L Q G L N K S E T A A K Y G E D K V L I W R R S Y D V P P X S L D E S D D R H P I K D P R Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
G G G S
G G G T T
S S
T T S T T
G G G S G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H I P K R E L P S T E C L K D T V A R V I P Y W T D E I A K E V L E G K K V I V A A H G N S L R A L V K Y F D N L S E E D V L K L N I P T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G S
S S
T T T
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence I P L V Y E L D K D L N P I K H Y Y L G D E S K I K K A X E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	X	Y	K	L	V	L	V	R	H	G	E	S	E	W	N	K	E	N	L	F	T	G	W	T	D	V	K	L	S	D	K	G	I	D	E	A	V	E	A	G	L	L	L	K	Q	E	G	Y	S	F	D	I	A	F	S	S	L	L	S	R	A	N	D	T	L	N	I	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	T	T	T	T	T	T				T	T					B																		T	T				S						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	E	L	G	Q	S	Y	I	S	V	K	K	T	W	R	L	N	E	R	H	Y	G	A	L	Q	G	L	N	K	S	E	T	A	A	K	Y	G	E	D	K	V	L	I	W	R	R	S	Y	D	V	P	P	X	S	L	D	E	S	D	D	R	H	P	I	K	D	P	R	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		T	T	S						G	G	G	S					G	G	G	T	T																						S	S								T	T	S	T	T		G	G	G	S	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	I	P	K	R	E	L	P	S	T	E	C	L	K	D	T	V	A	R	V	I	P	Y	W	T	D	E	I	A	K	E	V	L	E	G	K	K	V	I	V	A	A	H	G	N	S	L	R	A	L	V	K	Y	F	D	N	L	S	E	E	D	V	L	K	L	N	I	P	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		G	G	G	S		S	S																	T							T	T																					T													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	I	P	L	V	Y	E	L	D	K	D	L	N	P	I	K	H	Y	Y	L	G	D	E	S	K	I	K	K	A	X	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S									S