Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ejyA_

Fold library idPDB HeaderMoleculeTitle
c4ejyA_PDB header: hydrolase/dnaChain: A: PDB Molecule: 3-methyladenine dna glycosylase;PDBTitle: structure of mbogg1 in complex with high affinity dna ligand


Added to library: Sat Mar 23 08:27:55 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKYNVEEKGTKVIVRGIADFNLKETFESGQCFRWNEEEDGSYTGVAYDRVVNVKLEGDTLIIDNTNLTDF
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


TTS

S

TSSS
SS
TTS
TTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence YDIWFDYFDLGRDYGQIKESLSKDPVLKEAIKFGQGIRILRQDTWETLVSFIVSQNNRIPQIKKVIENLA
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTTTS
TTSTT
TT






TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TSFGNPIEYKGKIYYTFPKPEELVMYDVETIAKTRCGFRAKYIFDAASKVFSGEINLLKLHEYSTSEIRD
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S
TT



GGGTTTS
TTTTGGGTTSS
SSSGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILMTINGVGPKVADCVILYSIGRYDTFPTDVWIKRIVEHLYLKREGTPVEIQLFAIDKFGDLSGFAQQYL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTSTT

TT


S




TTSS


GGG
 .........
Sequence FYYGREMGK
Predicted secondary structure

SS confidence








Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D