Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4efjA_

Fold library idPDB HeaderMoleculeTitle
c4efjA_PDB header: hydrolase/dnaChain: A: PDB Molecule: laglidadg endonuclease;PDBTitle: crystal structure of i-gzemii laglidadg homing endonuclease in complex2 with dna target site


Added to library: Sat May 5 11:57:32 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SINPWFVTGFTDAEGSFMIHLEKNKDKWRVRPTFQIKLDIRDKSLLEEIKNYFNNTGSINTSNKECVYKV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S

SS
GGGTTT
S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSLKDISIIISHFDKYNLITQKKADFELFKKIINKLNSQEHLSYEVGATVLQEIISIRASMNLGLSSSVK
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SS


STT


S
TTTTSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence EDFPHIIPSNRPLIENMNIPHPEWMAGFVSGEGSFSVYTTSDDKYVSLSFRVSQHNKDKQLLKSFVDFFG
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S











S






TTS

STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CGGFNYHNKGNKAVIFVTRKFEDINDKIIPLFNEYKIKGVKYKDFKDWSKVAKMIESKSHLTTNGYKEIC
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S
SSTT
S

TS


STTTGGGS
 .........290.
Sequence KIKENMNSYRK
Predicted secondary structure

SS confidence










Known secondary structure (DSSP) SGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D