PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4ecdB_

Fold library id	PDB Header	Molecule	Title
c4ecdB_	PDB header: lyase	Chain: B: PDB Molecule: chorismate synthase;	PDBTitle: 2.5 angstrom resolution crystal structure of bifidobacterium longum2 chorismate synthase

Links to external resources
Added to library: Sat Apr 7 17:49:37 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M L R W Q T A G E S H G E A L V A M I E G L P A G V R I S T D D I V S A L A R R R L G Y Q D K V R L L T G V R H G L T L G S P V A I E I A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
B T
B
S T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R E T A S R V A L G E V A K Q F L D Q A F G I R T V A H V V A L G G V Q T N P D L P L P T P D D L E A L D A S P V R T L D K E A E V R I I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
G G G S T T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R I N E A A A D T L G G V I E V L A Y G V P A G I G T Y V E S D R R L D A A L A S A I M G I Q A F K G V E I G D G F L A R A G G I E G G M S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T T
B
S S S S T T S T S T T T T T T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . .

Sequence N G Q V I R V R G A M K P S T A V P A A S V V A E A M V R L T L A K Y A L D K F G G D S V A E T R R N L E S Y L A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S B T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	R	W	Q	T	A	G	E	S	H	G	E	A	L	V	A	M	I	E	G	L	P	A	G	V	R	I	S	T	D	D	I	V	S	A	L	A	R	R	R	L	G	Y	Q	D	K	V	R	L	L	T	G	V	R	H	G	L	T	L	G	S	P	V	A	I	E	I	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S											B	T		B																										S			T	T				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	E	T	A	S	R	V	A	L	G	E	V	A	K	Q	F	L	D	Q	A	F	G	I	R	T	V	A	H	V	V	A	L	G	G	V	Q	T	N	P	D	L	P	L	P	T	P	D	D	L	E	A	L	D	A	S	P	V	R	T	L	D	K	E	A	E	V	R	I	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																	T	T					T	T	S					G	G	G							S	T	T	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	I	N	E	A	A	A	D	T	L	G	G	V	I	E	V	L	A	Y	G	V	P	A	G	I	G	T	Y	V	E	S	D	R	R	L	D	A	A	L	A	S	A	I	M	G	I	Q	A	F	K	G	V	E	I	G	D	G	F	L	A	R	A	G	G	I	E	G	G	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G											S			T	T		B		S	S	S	S	T	T	S											T	S	T	T							T	T	T	T					T	T			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence	N	G	Q	V	I	R	V	R	G	A	M	K	P	S	T	A	V	P	A	A	S	V	V	A	E	A	M	V	R	L	T	L	A	K	Y	A	L	D	K	F	G	G	D	S	V	A	E	T	R	R	N	L	E	S	Y	L	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S													S																											S	B													T