Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4eatB_

Fold library idPDB HeaderMoleculeTitle
c4eatB_PDB header: ligaseChain: B: PDB Molecule: benzoate-coenzyme a ligase;PDBTitle: crystal structure of a benzoate coenzyme a ligase


Added to library: Sat Mar 30 14:33:37 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VTPPPEKFNFAEHLLQTNRVRPDKTAFVDDISSLSFAQLEAQTRQLAAALRAIGVKREERVLLLMLDGTD
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)




SB

TTT
TTS
SS
TT

TT


SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence WPVAFLGAIYAGIVPVAVNTLLTADDYAYMLEHSRAQAVLVSGALHPVLKAALTKSDHEVQRVIVSRPAA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT


TT

T
SGGGS




S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PLEPGEVDFAEFVGAHAPLEKPAATQADDPAFWLYSSGSTGRPKGVVHTHANPYWTSELYGRNTLHLRED
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)


TTTS


SS



BTTS

SSSS
SSTTTTTT


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVCFSAAKLFFAYGLGNALTFPMTVGATTLLMGERPTPDAVFKRWLGGVGGVKPTVFYGAPTGYAGMLAA
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
SS
TTSTTT



S


TT
STT


S

 .........290.........300.........310.........320.........330.........340.........350
Sequence PNLPSRDQVALRLASSAGEALPAEIGQRFQRHFGLDIVDGIGSTEMLHIFLSNLPDRVRYGTTGWPVPGY
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) TT


GGG




SS


S


TTT
S
BTTB

TTS


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QIELRGDGGGPVADGEPGDLYIHGPSSATMYWGNRAKSRDTFQGGWTKSGDKYVRNDDGSYTYAGRTDDM
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
TTSS


TTS

TT


TT
TT
TTS
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence LKVSGIYVSPFEIEATLVQHPGVLEAAVVGVADEHGLTKPKAYVVPRPGQTLSETELKTFIKDRLAPYKY
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
TTSTT
TTS

TT



TTS
GGGS
 .........500.........510.........
Sequence PRSTVFVAELPKTATGKIQRFKLREGVLG
Predicted secondary structure
















SS confidence




























Known secondary structure (DSSP)
S
S


B
TTS
B
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D