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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ea3B_

Fold library idPDB HeaderMoleculeTitle
c4ea3B_PDB header: signaling proteinChain: B: PDB Molecule: fusion protein of nociceptin receptor and cytochrome b562;PDBTitle: structure of the n/ofq opioid receptor in complex with a peptide2 mimetic


Added to library: Wed Jan 9 15:54:31 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQI
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Known secondary structure (DSSP)

SSSS

GGGSSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKM
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Known secondary structure (DSSP) T

TTGGG

TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAI
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Known secondary structure (DSSP)

TTTS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence CHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAEIECLVEIPTPQDYWGPVFAICIFLFSFIVP
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SST
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLVISVCYSLMIRRLEKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTAL
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Known secondary structure (DSSP)


TTT



S
 .........360.........370......
Sequence GYVNSCLNPILYAFLDENFKACFRKF
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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