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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4e85B_

Fold library idPDB HeaderMoleculeTitle
c4e85B_PDB header: structural proteinChain: B: PDB Molecule: mrna 3'-end-processing protein rna14;PDBTitle: crystal structure of hat domain of rna14


Added to library: Sat May 5 11:52:02 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESDVIGKLNDMIEEQPTDIFLYVKLLKHHVSLKQWKQVYETFDKLHDRFPLMANIWCMRLSLEFDKMEEL
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Known secondary structure (DSSP)



TT
TT

TT
TSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DAAVIEPVLARCLSKELGNNDLSLWLSYITYVRKKNDIITGGEEARNIVIQAFQVVVDKCAIFEPKSIQF
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Known secondary structure (DSSP)
TTTTSSSS



TS

TTTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence WNEYLHFLEHWKPVNKFEEQQRVQYIRKLYKTLLCQPMDCLESMWQRYTQWEQDVNQLTARRHIGELSAQ
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Known secondary structure (DSSP) T


SSSTS

TTTTTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YMNARSLYQDWLNITKGLKRNLPITLNQATESNLPKPNEYDVQQLLIWLEWIRWESDNKLELSDDLHKAR
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Known secondary structure (DSSP) SS





SSGGG

TTSS

TT



TT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEI
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Known secondary structure (DSSP) TTT
SSS
TT
TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV
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Known secondary structure (DSSP)
TT

TTGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDS
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Known secondary structure (DSSP)
TTTT
SS
TT
TTTT


S
 .........500.........510.........520.........530.........540.........550..
Sequence HLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPEVNKLEEFTNKYKVLDVNYLQRLELDY
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Known secondary structure (DSSP) TS
SSTT

TTT
SSS

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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