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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4e6tA_ | PDB header: transferase | Chain: A: PDB Molecule: acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o- | PDBTitle: structure of lpxa from acinetobacter baumannii at 1.8a resolution2 (p212121 form) |
Added to library: Wed Jan 9 15:04:16 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | Y | F | Q | G | A | D | L | I | H | S | T | A | I | I | D | P | S | A | V | I | A | S | D | V | Q | I | G | P | Y | C | I | I | G | P | Q | V | T | I | G | A | G | T | K | L | H | S | H | V | V | V | G | G | F | T | R | I | G | Q | N | N | E | I | F | Q | F | A | S | V | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | E | V | C | Q | D | L | K | Y | K | G | E | E | T | W | L | E | I | G | N | N | N | L | I | R | E | H | C | S | L | H | R | G | T | V | Q | D | N | A | L | T | K | I | G | S | H | N | L | L | M | V | N | T | H | I | A | H | D | C | I | V | G | D | H | N | I | F | A | N | N | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | G | V | A | G | H | V | H | I | G | D | H | V | I | V | G | G | N | S | G | I | H | Q | F | C | K | I | D | S | Y | S | M | I | G | G | A | S | L | I | L | K | D | V | P | A | Y | V | M | A | S | G | N | P | A | H | A | F | G | I | N | I | E | G | M | R | R | K | G | W | S | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | B | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Sequence | N | T | I | Q | G | L | R | E | A | Y | K | L | I | F | K | S | G | L | T | S | V | Q | A | I | D | Q | I | K | S | E | I | L | P | S | V | P | E | A | Q | L | L | I | D | S | L | E | Q | S | E | R | G | I | V | R | ||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B |
Download: | PDB structure | FASTA sequence |
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