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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4e2i3_

Fold library idPDB HeaderMoleculeTitle
c4e2i3_PDB header: hydrolase/dna binding proteinChain: 3: PDB Molecule: dna polymerase alpha subunit b;PDBTitle: the complex structure of the sv40 helicase large t antigen and p682 subunit of dna polymerase alpha-primase


Added to library: Sat Jun 16 13:07:24 2012
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MSASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTSTHKVGLTSEILNSFEHEFL
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Known secondary structure (DSSP)



TT



S


TTTT




TTTTTGGGTTTS
 ........
Sequence SKRLSKAR
Predicted secondary structure

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Known secondary structure (DSSP) GGG
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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