PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4e1sA_

Fold library id	PDB Header	Molecule	Title
c4e1sA_	PDB header: cell adhesion	Chain: A: PDB Molecule: intimin;	PDBTitle: x-ray crystal structure of the transmembrane beta-domain from intimin2 from ehec strain o157:h7

Links to external resources
Added to library: Sat Jun 16 13:08:05 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q H Y G T A E V N L Q S G N N F D G S S L D F L L P F Y D S E K M L A F G Q V G A R Y I D S R F T A N L G A G Q R F F L P A N M L G Y N V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S S T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I D Q D F S G D N T R L G I G G E Y W R D Y F K S S V N G Y F R M S G W H E S Y N K K D Y D E R P A N G F D I R F N G Y L P S Y P A L G A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T
S
S S S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I Y E Q Y Y G D N V A L F N S D K L Q S N P G A A T V G V N Y T P I P L V T M G I D Y R H G T G N E N D L L Y S M Q F R Y Q F D K S W S Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S B
S S
S S S
B S S
T T G G G T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence Q I E P Q Y V N E L R T L S G S R Y D L V Q R N N N I I L E Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S T T T S T T
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	H	Y	G	T	A	E	V	N	L	Q	S	G	N	N	F	D	G	S	S	L	D	F	L	L	P	F	Y	D	S	E	K	M	L	A	F	G	Q	V	G	A	R	Y	I	D	S	R	F	T	A	N	L	G	A	G	Q	R	F	F	L	P	A	N	M	L	G	Y	N	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	T	T															S	S													T	T															S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	D	Q	D	F	S	G	D	N	T	R	L	G	I	G	G	E	Y	W	R	D	Y	F	K	S	S	V	N	G	Y	F	R	M	S	G	W	H	E	S	Y	N	K	K	D	Y	D	E	R	P	A	N	G	F	D	I	R	F	N	G	Y	L	P	S	Y	P	A	L	G	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T													T	T												S						S	S	S	T	T																		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	Y	E	Q	Y	Y	G	D	N	V	A	L	F	N	S	D	K	L	Q	S	N	P	G	A	A	T	V	G	V	N	Y	T	P	I	P	L	V	T	M	G	I	D	Y	R	H	G	T	G	N	E	N	D	L	L	Y	S	M	Q	F	R	Y	Q	F	D	K	S	W	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	B		S	S		S	S	S		B	S	S														T	T											G	G	G														T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	Q	I	E	P	Q	Y	V	N	E	L	R	T	L	S	G	S	R	Y	D	L	V	Q	R	N	N	N	I	I	L	E	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		T								S	T	T	T	S	T	T					S			S