Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4e1jA_

Fold library idPDB HeaderMoleculeTitle
c4e1jA_PDB header: transferaseChain: A: PDB Molecule: glycerol kinase;PDBTitle: crystal structure of glycerol kinase in complex with glycerol from2 sinorhizobium meliloti 1021


Added to library: Sat Mar 24 12:17:07 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLGTENLYFQSXXGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVST
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TT
TT






S

SS
TTS



B
SSTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence VKEAIEKSGITANDIAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTG
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TTT

GGG
SS
TTT

BSS

TT

TTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATNASRTLLYNIAENAW
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
SSTTSSTTTT
TTT


TTSSSTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DDELTEVLRVPKEXLPEVKDCAADFGVTDPSLFGAAIPILGVAGDQQAATIGQACFKPGXLKSTYGTGCF
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
T

GGGS

SBS


B

TS

B

TT

STT
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALLNTGKDXVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKVITGSLAESADPSQEVYLV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
TT




SSS
TTS
STT



TS
TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence PAFTGLGAPHWDPDARGAIFGXTRNTGPAEFARAALEAVCYQTRDLLEAXHKDWRTVLRVDGGXVASDWT
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)

TT
B
TTT
BTT





TT





SGGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence XQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFAKSWARDRRFEPHXDEATRKVKLKGWRS
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TS
S


TSS

T




S
 ........
Sequence AVKRTLIA
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D