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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4e04B_

Fold library idPDB HeaderMoleculeTitle
c4e04B_PDB header: signaling proteinChain: B: PDB Molecule: bacteriophytochrome (light-regulated signal transductionPDBTitle: rpbphp2 chromophore-binding domain crystallized by homologue-directed2 mutagenesis.


Added to library: Sat Jul 28 13:43:28 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLSTCDDEPIHIPGAIQPHGLLLALAADMTIVAGSDNLPELTGLAIGALIGRSAADVFDSETHNRLTIAL
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Known secondary structure (DSSP)



GGGS
TT

S
TTS
TT
BTTTTTTTSS
GGGTTTSBGGGTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence AEPGAAVGAPIAVGFTMPDGERAFNGSWHRHDQLVFLELEPPQRDVRYPQAFFRSVRSAIRRLQAAETLE
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Known secondary structure (DSSP) SSS

S

SS
TT


SS


T

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SACAAAAQEVREITGFDRVMIYRFASDFSGEVIAEDRCAEVESYLGLHFPASDIPAQARRLYTINPVRII
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Known secondary structure (DSSP)

S
TTS

TTS


TT

GGGS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDINYRPVPVTPDLNPRTGRPIDLSFAILRSVSPVHLEYMRNIGMHGTMSISILRGERLWGLIACHHRKP
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Known secondary structure (DSSP) S
TT


S

BTTTTB



TT
TTB


TT

TTSS
 .........290.........300.........310
Sequence NYVDLEVRQACELVAQVLAWQIGVMEEQAL
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Known secondary structure (DSSP)







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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