PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4dunA_

Fold library id	PDB Header	Molecule	Title
c4dunA_	PDB header: biosynthetic protein	Chain: A: PDB Molecule: putative phenazine biosynthesis phzc/phzf protein;	PDBTitle: 1.76a x-ray crystal structure of a putative phenazine biosynthesis2 phzc/phzf protein from clostridium difficile (strain 630)

Links to external resources
Added to library: Sat Mar 17 11:48:21 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M E Y Y I V D S F A T K L F K G N P A G V C V L D R R I P L E L M Q K I A E E N N L P E T A F V V K G K G N Y E L R W F T P K A E I D L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S T T
S S S
S S T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G H A T L A A A Y V I S N F I D V N V K K I D F F T Q S G K L E V T R N G N L Y E M I F P E I M P I E I E L S P Q Q A N L I G C V P S D V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
S T T T T
S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S R D L I L L L N S E Q E V I N Y K P N Y A Q L R K L T D W L G I I I T A Q G S N T D F V S R Y F C P E L D S E D P V T G S S H C N L I P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T
T T
S
S S S S T T T T S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . .

Sequence Y W S E K L G K H K M V A A Q L S N R G G I I Q C E V L K D N T V K I S G E A V L F M Q G T I K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	E	Y	Y	I	V	D	S	F	A	T	K	L	F	K	G	N	P	A	G	V	C	V	L	D	R	R	I	P	L	E	L	M	Q	K	I	A	E	E	N	N	L	P	E	T	A	F	V	V	K	G	K	G	N	Y	E	L	R	W	F	T	P	K	A	E	I	D	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T		S	S	T	T		S									S	S																S	S									T	T									S	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	H	A	T	L	A	A	A	Y	V	I	S	N	F	I	D	V	N	V	K	K	I	D	F	F	T	Q	S	G	K	L	E	V	T	R	N	G	N	L	Y	E	M	I	F	P	E	I	M	P	I	E	I	E	L	S	P	Q	Q	A	N	L	I	G	C	V	P	S	D	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	T	T		S							T	T									T	T																								S	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	R	D	L	I	L	L	L	N	S	E	Q	E	V	I	N	Y	K	P	N	Y	A	Q	L	R	K	L	T	D	W	L	G	I	I	I	T	A	Q	G	S	N	T	D	F	V	S	R	Y	F	C	P	E	L	D	S	E	D	P	V	T	G	S	S	H	C	N	L	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S						S																T	T		T	T		S									S	S	S	S								T	T	T	T				S			S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Sequence	Y	W	S	E	K	L	G	K	H	K	M	V	A	A	Q	L	S	N	R	G	G	I	I	Q	C	E	V	L	K	D	N	T	V	K	I	S	G	E	A	V	L	F	M	Q	G	T	I	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		S								S	S	S										S	S	S