PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4dteA_

Fold library id	PDB Header	Molecule	Title
c4dteA_	PDB header: hydrolase inhibitor	Chain: A: PDB Molecule: serpin peptidase inhibitor, clade e (nexin, plasminogen	PDBTitle: crystal structure of zebrafish plasminogen activator inhibitor i

Links to external resources
Added to library: Sat Mar 30 08:27:22 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L I Q D K Q T D F G L Q V F A E A V Q S A P D R N L A L S P Y G I A S V L G M A Q M G A Y G A T L K L L A S K M G Y S L Q E R G M P K L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L L Q R D L A S E D G V E V A S G V M V D R K I I L E K V F R R S L S K A F Q S V P H Q I D F S Q P E M A R Q V I N S W T S D H T D G M I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T S
S
T T S T T T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S E F L P S G V L S E L T R L V F L N A L H F H G V W K T P F D P R N T R E Q L F H T V N G S A V S V P M M T T T Q K F N Y G E F V S K D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
T T
B S S
G G G
T T S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V D Y D V I E M P Y E G E S I S M L L V T P F E K D V P L S A L N K E L S S S R I H Q W R Q E M R K I S K Q L S I P R F S M D T E I D L K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T S S S S T T S
G G G G G G G
S
T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence T L S R M G L G D I F S Q S R A D F S R I T T E E P L C V S K V L Q R V K L E V N E E G T K G S S A T A A V I Y S R M A V E E I T L D R P F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G
T T T
T T T
S S S
S
B S T T
S S
S S
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . .

Sequence F F L I Q H K P T G A L L F S G Q L T Q P Q E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	I	Q	D	K	Q	T	D	F	G	L	Q	V	F	A	E	A	V	Q	S	A	P	D	R	N	L	A	L	S	P	Y	G	I	A	S	V	L	G	M	A	Q	M	G	A	Y	G	A	T	L	K	L	L	A	S	K	M	G	Y	S	L	Q	E	R	G	M	P	K	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T	S																																	S			T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	L	Q	R	D	L	A	S	E	D	G	V	E	V	A	S	G	V	M	V	D	R	K	I	I	L	E	K	V	F	R	R	S	L	S	K	A	F	Q	S	V	P	H	Q	I	D	F	S	Q	P	E	M	A	R	Q	V	I	N	S	W	T	S	D	H	T	D	G	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	T	T											T	T	S															S								T	T	S															T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	E	F	L	P	S	G	V	L	S	E	L	T	R	L	V	F	L	N	A	L	H	F	H	G	V	W	K	T	P	F	D	P	R	N	T	R	E	Q	L	F	H	T	V	N	G	S	A	V	S	V	P	M	M	T	T	T	Q	K	F	N	Y	G	E	F	V	S	K	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	S			T	T															B	S	S				G	G	G									T	T	S																						T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	D	Y	D	V	I	E	M	P	Y	E	G	E	S	I	S	M	L	L	V	T	P	F	E	K	D	V	P	L	S	A	L	N	K	E	L	S	S	S	R	I	H	Q	W	R	Q	E	M	R	K	I	S	K	Q	L	S	I	P	R	F	S	M	D	T	E	I	D	L	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B	T	T	S	S									S	S	T	T	S		G	G	G	G	G	G	G		S																															T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	L	S	R	M	G	L	G	D	I	F	S	Q	S	R	A	D	F	S	R	I	T	T	E	E	P	L	C	V	S	K	V	L	Q	R	V	K	L	E	V	N	E	E	G	T	K	G	S	S	A	T	A	A	V	I	Y	S	R	M	A	V	E	E	I	T	L	D	R	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		G	G	G	G		T	T	T				T	T	T		S	S	S																	S		B	S	T	T			S	S							S	S									S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Sequence	F	F	L	I	Q	H	K	P	T	G	A	L	L	F	S	G	Q	L	T	Q	P	Q	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T										S		T	T