Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4doxA_

Fold library idPDB HeaderMoleculeTitle
c4doxA_PDB header: viral proteinChain: A: PDB Molecule: coat protein;PDBTitle: crystal structure of papaya mosaic virus capsid protein


Added to library: Sat Jun 16 13:04:22 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IAFPAITQEQMSSIKVDPTSNLLPSQEQLKSVSTLMVAAKVPAASVTTVALELVNFCYDNGSSAYTTVTG
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S










SSS

TT

GGG


TT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PSSIPEISLAQLASIVKASGTSLRKFCRYFAPIIWNLRTDKMAPANWEASGYKPSAKFAAFDFFDGVENP
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) B
SSTT
BTT

TTTTTS

TTTTTTT

GGGGGG
STTGGGTT
T
 .........150.........160....
Sequence AAMQPPSGLTRSPTQEERIANATN
Predicted secondary structure















SS confidence























Known secondary structure (DSSP) TS


TT

SS


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D