PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4dokA_

Fold library id	PDB Header	Molecule	Title
c4dokA_	PDB header: isomerase	Chain: A: PDB Molecule: similarity to chalcone-flavonone isomerase;	PDBTitle: crystal structure of arabidopsis thaliana chalcone-isomerase like2 protein at5g05270 (atchil)

Links to external resources
Added to library: Sat May 12 11:35:30 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S T G M V M V H E V P F P P Q I I T S K P L S L L G Q G I T D I E I H F L Q V K F T A I G V Y L D P S D V K T H L D N W K G K T G K E L A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S T T
G G G T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D D D F F D A L A S A E M E K V I R V V V I K E I K G A Q Y G V Q L E N T V R D R L A E E D K Y E E E E E T E L E K V V G F F Q S K Y F K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S
T T
S T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence N S V I T Y H F S A K D G I C E I G F E T E G K E E E K L K V E N A N V V G M M Q R W Y L S G S R G V S P S T I V S I A D S I S A V L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
T T S
S
T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	G	M	V	M	V	H	E	V	P	F	P	P	Q	I	I	T	S	K	P	L	S	L	L	G	Q	G	I	T	D	I	E	I	H	F	L	Q	V	K	F	T	A	I	G	V	Y	L	D	P	S	D	V	K	T	H	L	D	N	W	K	G	K	T	G	K	E	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					S				S	S	S															T	T																						G	G	G	T	T								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	D	D	F	F	D	A	L	A	S	A	E	M	E	K	V	I	R	V	V	V	I	K	E	I	K	G	A	Q	Y	G	V	Q	L	E	N	T	V	R	D	R	L	A	E	E	D	K	Y	E	E	E	E	E	T	E	L	E	K	V	V	G	F	F	Q	S	K	Y	F	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S									S	S																						T	T			S																T					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	N	S	V	I	T	Y	H	F	S	A	K	D	G	I	C	E	I	G	F	E	T	E	G	K	E	E	E	K	L	K	V	E	N	A	N	V	V	G	M	M	Q	R	W	Y	L	S	G	S	R	G	V	S	P	S	T	I	V	S	I	A	D	S	I	S	A	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									S	S	S										T	T	S																					S		T	T	T		S