Fold library entry viewer: c4dnaA_

Added to library: Sat Mar 24 13:25:53 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	D	Y	D	L	F	V	I	G	G	G	S	G	G	V	R	S	G	R	L	A	A	A	L	G	K	K	V	A	I	A	E	E	F	R	Y	G	G	T	C	V	I	R	G	C	V	P	K	K	L	Y	V	Y	A	S	Q	F	A	E	H	F	E	D	A	A	G	F	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									S												T	T	T								S	S		T	T							S																				G	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	V	G	E	S	R	F	D	W	A	K	L	V	A	A	K	E	Q	E	I	A	R	L	E	G	L	Y	R	K	G	L	A	N	A	G	A	E	I	L	D	T	R	A	E	L	A	G	P	N	T	V	K	L	L	A	S	G	K	T	V	T	A	E	R	I	V	I	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T						S					S	S	S	S					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	H	P	S	P	H	D	A	L	P	G	H	E	L	C	I	T	S	N	E	A	F	D	L	P	A	L	P	E	S	I	L	I	A	G	G	G	Y	I	A	V	E	F	A	N	I	F	H	G	L	G	V	K	T	T	L	I	Y	R	G	K	E	I	L	S	R	F	D	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	T	T	G	G	G		B						T	T		S	S			S								S													T	T								S	S	S	S	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	X	R	R	G	L	H	A	A	X	E	E	K	G	I	R	I	L	C	E	D	I	I	Q	S	V	S	A	D	A	D	G	R	R	V	A	T	T	X	K	H	G	E	I	V	A	D	Q	V	X	L	A	L	G	R	X	P	N	T	N	G	L	G	L	E	A	A	G	V	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T						S										T	T	S							S	S	S						S						S					S		T	T	S	S	T	G	G	G	T			B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	E	L	G	A	I	I	V	D	A	F	S	R	T	S	T	P	G	I	Y	A	L	G	D	V	T	D	R	V	Q	L	T	P	V	A	I	H	E	A	X	C	F	I	E	T	E	Y	K	N	N	P	T	S	P	D	H	D	L	I	A	T	A	V	F	S	Q	P	E	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		B				T	T		B		S	S	T	T					S	G	G	G	S	S																				S	S								S								S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	V	G	I	T	E	E	E	A	A	R	K	F	Q	E	I	E	V	Y	R	A	E	F	R	P	X	K	A	T	L	S	G	R	K	E	K	T	I	X	K	L	V	V	N	A	A	D	R	K	V	V	G	A	H	I	L	G	H	D	A	G	E	X	A	Q	L	L	G	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S												T	T																		T	T	T		B								S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Sequence	L	R	A	G	C	T	K	D	D	F	D	R	T	X	A	V	H	P	T	A	A	E	E	L	V	T	X	Y	Q	P	S	Y	R	V	R	N	G	E	R	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		B						T	S				T	T		S	G	G	G	G	T				S		S					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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