PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4dmmA_

Fold library id	PDB Header	Molecule	Title
c4dmmA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: 3-oxoacyl-[acyl-carrier-protein] reductase;	PDBTitle: 3-oxoacyl-[acyl-carrier-protein] reductase from synechococcus2 elongatus pcc 7942 in complex with nadp

Links to external resources
Added to library: Sat Feb 25 12:02:03 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L P L T D R I A L V T G A S R G I G R A I A L E L A A A G A K V A V N Y A S S A G A A D E V V A A I A A A G G E A F A V K A D V S Q E S E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T
S S T T
S S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E A L F A A V I E R W G R L D V L V N N A G I T R D T L L L R M K R D D W Q S V L D L N L G G V F L C S R A A A K I M L K Q R S G R I I N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S V V G E M G N P G Q A N Y S A A K A G V I G L T K T V A K E L A S R G I T V N A V A P G F I A T D M T S E L A A E K L L E V I P L G R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T
B T T S
S
G G G
T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence G E A A E V A G V V R F L A A D P A A A Y I T G Q V I N I D G G L V M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
G G G G G
S
S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	P	L	T	D	R	I	A	L	V	T	G	A	S	R	G	I	G	R	A	I	A	L	E	L	A	A	A	G	A	K	V	A	V	N	Y	A	S	S	A	G	A	A	D	E	V	V	A	A	I	A	A	A	G	G	E	A	F	A	V	K	A	D	V	S	Q	E	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T						T	T		S	S													T	T								S	S															T	T										T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	L	F	A	A	V	I	E	R	W	G	R	L	D	V	L	V	N	N	A	G	I	T	R	D	T	L	L	L	R	M	K	R	D	D	W	Q	S	V	L	D	L	N	L	G	G	V	F	L	C	S	R	A	A	A	K	I	M	L	K	Q	R	S	G	R	I	I	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S																	G	G	G														T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	V	V	G	E	M	G	N	P	G	Q	A	N	Y	S	A	A	K	A	G	V	I	G	L	T	K	T	V	A	K	E	L	A	S	R	G	I	T	V	N	A	V	A	P	G	F	I	A	T	D	M	T	S	E	L	A	A	E	K	L	L	E	V	I	P	L	G	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																							G	G	G	T											B	T	T	S		S									G	G	G		T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	G	E	A	A	E	V	A	G	V	V	R	F	L	A	A	D	P	A	A	A	Y	I	T	G	Q	V	I	N	I	D	G	G	L	V	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																G	G	G	G	G			S						S	T	T	S