PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4dl0J_

Fold library id	PDB Header	Molecule	Title
c4dl0J_	PDB header: hydrolase	Chain: J: PDB Molecule: v-type proton atpase subunit e;	PDBTitle: crystal structure of the heterotrimeric egchead peripheral stalk2 complex of the yeast vacuolar atpase

Links to external resources
Added to library: Sat Oct 20 16:12:35 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S A I T A L T P N Q V N D E L N K M Q A F I R K E A E E K A K E I Q L K A D Q E Y E I E K T N I V R N E T N N I D G N F K S K L K K A M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S Q Q I T K S T I A N K M R L K V L S A R E Q S L D G I F E E T K E K L S G I A N N R D E Y K P I L Q S L I V E A L L K L L E P K A I V K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L E R D V D L I E S M K D D I M R E Y G E K A Q R A P L E E I V I S N D Y L N K D L V S G G V V V S N A S D K I E I N N T L E E R L K L L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T T S
S S
T T T
S S T T S S

. . . . . . . . . 220 . . .

Sequence E E A L P A I R L E L Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	A	I	T	A	L	T	P	N	Q	V	N	D	E	L	N	K	M	Q	A	F	I	R	K	E	A	E	E	K	A	K	E	I	Q	L	K	A	D	Q	E	Y	E	I	E	K	T	N	I	V	R	N	E	T	N	N	I	D	G	N	F	K	S	K	L	K	K	A	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	Q	Q	I	T	K	S	T	I	A	N	K	M	R	L	K	V	L	S	A	R	E	Q	S	L	D	G	I	F	E	E	T	K	E	K	L	S	G	I	A	N	N	R	D	E	Y	K	P	I	L	Q	S	L	I	V	E	A	L	L	K	L	L	E	P	K	A	I	V	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																									T																							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	E	R	D	V	D	L	I	E	S	M	K	D	D	I	M	R	E	Y	G	E	K	A	Q	R	A	P	L	E	E	I	V	I	S	N	D	Y	L	N	K	D	L	V	S	G	G	V	V	V	S	N	A	S	D	K	I	E	I	N	N	T	L	E	E	R	L	K	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T						T	T													T	T	S									S	S				T	T	T		S	S							T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	E	E	A	L	P	A	I	R	L	E	L	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)