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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4dkjA_

Fold library idPDB HeaderMoleculeTitle
c4dkjA_PDB header: transferase/dnaChain: A: PDB Molecule: cytosine-specific methyltransferase;PDBTitle: cpg specific methyltransferase in complex with target dna


Added to library: Wed Jan 9 16:03:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKIKVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILS
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Known secondary structure (DSSP)


T
TT
T

B
SS




B


TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence ISNDSKMPISEYGIKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQK
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Known secondary structure (DSSP)
BSSSSS


TTBS
B


GGG

TTTS
SS
S



TTT
TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence GIDKELNTRSGLLWEIERILEEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTY
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Known secondary structure (DSSP)


GGG

SGGGS
GGGS
SGGGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLNSKNFDNCQNRERVFCLSIRDDYLEKTGFKFKELEKVKNPPKKIKDILVDSSNYKYLNLNKYETTTFR
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Known secondary structure (DSSP) GGGTT
SB







GGG






GGGG



S






TTS




 .........290.........300.........310.........320.........330.........340.........350
Sequence ETKSNIISRPLKNYTTFNSENYVYNINGIGPTLTASGANSRIKIETQQGVRYLTPLECFKYMQFDVNDFK
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Known secondary structure (DSSP)
TTSB
TTS
S
GGGSTTSBB



SSSGGGS
TT

TT

 .........360.........370.........380........
Sequence KVQSTNLISENKMIYIAGNSIPVKILEAIFNTLEFVNN
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Known secondary structure (DSSP) TS
S
TS

T






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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