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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4djhA_

Fold library idPDB HeaderMoleculeTitle
c4djhA_PDB header: hormone receptor/antagonistChain: A: PDB Molecule: kappa-type opioid receptor, lysozyme;PDBTitle: structure of the human kappa opioid receptor in complex with jdtic


Added to library: Sat Mar 24 13:20:45 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSW
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Known secondary structure (DSSP)
T
GGG

TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAI
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Known secondary structure (DSSP)
STT
TTTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGNIF
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Known secondary structure (DSSP)
SSSS


SSSTTTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence EMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAA
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Known secondary structure (DSSP) T


SSS
TTSSS
SS

TTB

 .........290.........300.........310.........320.........330.........340.........350
Sequence VRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPN
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Known secondary structure (DSSP) STTS
T
TT
TSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RAKRVITTFRTGTWDAYREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSAALSSYYFCIALGY
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Known secondary structure (DSSP) SSSTTTS






 .........430.........440.......
Sequence TNSSLNPILYAFLDENFKRCFRDFCFP
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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