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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4djaA_

Fold library idPDB HeaderMoleculeTitle
c4djaA_PDB header: lyaseChain: A: PDB Molecule: photolyase;PDBTitle: crystal structure of a prokaryotic (6-4) photolyase phrb from2 agrobacterium tumefaciens with an fe-s cluster and a 6,7-dimethyl-8-3 ribityllumazine antenna chromophore at 1.45a resolution


Added to library: Sat Apr 20 08:33:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQLVLILGDQLSPSIAALDGVDKKQDTIVLCEVMAEASYVGHHKKKIAFIFSAMRHFAEELRGEGYRVRY
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Known secondary structure (DSSP)


TT


TT
GGGTT

TTT


SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TRIDDADNAGSFTGEVKRAIDDLTPSRICVTEPGEWRVRSEMDGFAGAFGIQVDIRSDRRFLSSHGEFRN
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Known secondary structure (DSSP)
TT
TT

SS

S

SST
S

TTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence WAAGRKSLTMEYFYREMRRKTGLLMNGEQPVGGRWNFDRQPARPDLLRPKHPVFAPDKITKEVIDTVERL
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Known secondary structure (DSSP) TT
SS


TTTTGGG
S









TTS








 .........220.........230.........240.........250.........260.........270.........280
Sequence FPDNFGKLENFGFAVTRTDAERALSAFIDDFLCNFGATQDAMLQDDPNLNHSLLSFYINCGLLDALDVCK
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Known secondary structure (DSSP)
TTSSS

TT




STGGGTTTTTT
BBTTBSSTT



TTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAERAYHEGGAPLNAVEGFIRQIIGWREYMRGIYWLAGPDYVDSNFFENDRSLPVFYWTGKTHMNCMAKV
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Known secondary structure (DSSP) TTSS
T
GGGGG

TT


B


T


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ITETIENAYAHHIQRLMITGNFALLAGIDPKAVHRWYLEVYADAYEWVELPNVIGMSQFADGGFLGTKPY
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Known secondary structure (DSSP) S


TTTB

TT

TTTT
TTTTTTS



 .........430.........440.........450.........460.........470.........480.........490
Sequence AASGNYINRMSDYCDTCRYDPKERLGDNACPFNALYWDFLARNREKLKSNHRLAQPYATWARMSEDVRHD
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Known secondary structure (DSSP)


BSGGGG
SSBTT

SSTTB
TTT
GGGTS
 .........500.........
Sequence LRAKAAAFLRKLDAAALEH
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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