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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4dj2C_

Fold library idPDB HeaderMoleculeTitle
c4dj2C_PDB header: protein bindingChain: C: PDB Molecule: period circadian protein homolog 1;PDBTitle: unwinding the differences of the mammalian period clock proteins from2 crystal structure to cellular function


Added to library: Sat Mar 3 11:50:28 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPS
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Known secondary structure (DSSP)

STTTTTTTTT
TT
SSSS

TTS
GGGSSS

GGGTB
T
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLPTWGKSVFCRIRGGPDPRYQPFRLTPYVTKIRCLLIAERIHSGYEAPRIPPDKRIFTTRHTPSCLFQD
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Known secondary structure (DSSP) G

B





S




B







TTSSS


TTT

TTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWA
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Known secondary structure (DSSP)
TTS

TTSBGGGGB
GGGTTTTTT


TTS

 .........220.........230.........240.........250.........260....
Sequence GFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPALDSDIQELSEQIHRLLLQPVH
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Known secondary structure (DSSP)

TTT
SSS

S


TTS





TS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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