PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4dibF_

Fold library id	PDB Header	Molecule	Title
c4dibF_	PDB header: oxidoreductase	Chain: F: PDB Molecule: glyceraldehyde 3-phosphate dehydrogenase;	PDBTitle: the crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 bacillus anthracis str. sterne

Links to external resources
Added to library: Sat Feb 25 11:27:46 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T R V A I N G F G R I G R M V F R Q A I E S A F E I V A I N A S Y P S E T L A H L I K Y D T V H G K F D G T V E A F E D H L L V D G K M I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S S
T T T
S S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L L N N R D P K E L P W T D L G V E V V I E A T G K F N S K E K A I L H V E A G A K K V I L T A P G K N E D V T I V V G V N E D Q L D I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T
S S S
B T T T
S S S
B S
S
T T T S G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K H T V I S N A S C T T N C L A P V V K V L D E Q F G I E N G L M T T V H A L R R A R A C G Q S I I P T T T G A A K A L A K V L P H L N G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
T T S
S T T
T T T T
G G G T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L H G M A L R V P T P N V S L V D L V V D V K R D V T V E A I N D A F K T V A N G A L K G I V E F S E E P L V S I D F N T N T H S A I I D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S
T T T B T T
S
G G G G T T
S G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . .

Sequence L S T M V M G D R K V K V L A W Y D N E W G Y S R R V V D L V T L V V D E L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	R	V	A	I	N	G	F	G	R	I	G	R	M	V	F	R	Q	A	I	E	S	A	F	E	I	V	A	I	N	A	S	Y	P	S	E	T	L	A	H	L	I	K	Y	D	T	V	H	G	K	F	D	G	T	V	E	A	F	E	D	H	L	L	V	D	G	K	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S														S									S	S													T	T	T				S	S						S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	L	N	N	R	D	P	K	E	L	P	W	T	D	L	G	V	E	V	V	I	E	A	T	G	K	F	N	S	K	E	K	A	I	L	H	V	E	A	G	A	K	K	V	I	L	T	A	P	G	K	N	E	D	V	T	I	V	V	G	V	N	E	D	Q	L	D	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		G	G	G							T								S	S	S			B					T					T	T		S					S	S			B	S		S					T	T	T	S	G	G	G			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	H	T	V	I	S	N	A	S	C	T	T	N	C	L	A	P	V	V	K	V	L	D	E	Q	F	G	I	E	N	G	L	M	T	T	V	H	A	L	R	R	A	R	A	C	G	Q	S	I	I	P	T	T	T	G	A	A	K	A	L	A	K	V	L	P	H	L	N	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S																							T															T	T	S		S	T	T									T	T	T	T						G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	H	G	M	A	L	R	V	P	T	P	N	V	S	L	V	D	L	V	V	D	V	K	R	D	V	T	V	E	A	I	N	D	A	F	K	T	V	A	N	G	A	L	K	G	I	V	E	F	S	E	E	P	L	V	S	I	D	F	N	T	N	T	H	S	A	I	I	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	S											S	S																	T	T	T	B	T	T						S				G	G	G	G	T	T				S					G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Sequence	L	S	T	M	V	M	G	D	R	K	V	K	V	L	A	W	Y	D	N	E	W	G	Y	S	R	R	V	V	D	L	V	T	L	V	V	D	E	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G					T	T	T										T	T