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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4dgwA_

Fold library idPDB HeaderMoleculeTitle
c4dgwA_PDB header: splicingChain: A: PDB Molecule: pre-mrna-splicing factor prp9;PDBTitle: crystal structure of the sf3a splicing factor complex of u2 snrnp


Added to library: Sat May 5 11:42:47 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EXNLLETRRSLLEEXEIIENAIAERIQRNPELYYHYIQESSKVFPDTKLPRSSLIAENKIYKFKKVKRKR
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Known secondary structure (DSSP)



TTTSTT




TBSSS
B




 .........80.........90.........100.........110.........120.........130.........140
Sequence KQIILQQHEINIFLRDYQEKQQTFNKINFERKLQQLEKELKNEDENFELDINSKKDKYALFSSSSDPSRR
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Known secondary structure (DSSP)

TTSS








STSTT
SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNILSDRARDLDLNEIFTRDEQYGEYXELEQFHSLWLNVIKRGDCSLLQFLDILELFLDDEKYLLTPPXD
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Known secondary structure (DSSP) S

S
GGGTT

GGGTS
TTTGGGT



TSS


GGGSSSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RKNDRYXAFLLKLSKYVETFFFKSYALLDAAAVENLIKSDFEHSYCRGSLRSEAKGIYCPFCSRWFKTSS
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Known secondary structure (DSSP) TT

TTS
TGGGT

TTT
BTTTTB
BSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VFESHLVGKIHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRTRSFVERKLAFTANERXAEXDILTQKYEA
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Known secondary structure (DSSP) TTSSSSTT

TS
 .........360.....
Sequence PAYDSTEKEGAEQVD
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Known secondary structure (DSSP)
SS
TT

SS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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