PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4dg7D_

Fold library id	PDB Header	Molecule	Title
c4dg7D_	PDB header: dna binding protein	Chain: D: PDB Molecule: gm27569p;	PDBTitle: low resolution structure of drosophila translin

Links to external resources
Added to library: Thu Jan 10 01:41:09 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L D I F S N Y Q K Y I D N E Q E V R E N I R I V V R E I E H L S K E A Q I K L Q I I H S D L S Q I S A A C G L A R K Q V E L C A Q K Y Q K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G G T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A E L V P A G Q Y Y R Y S D H W T F I T Q R L I F I I A L V I Y L E A G F L V T R E T V A E M L G L K I S Q S E G F H L D V E D Y L L G I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G S G G G T S S
T T T
B S S T T T S S B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q L A S E L S R F A T N S V T M G D Y E R P L N I S H F I G D L N T G F R L L N L K N D G L R K R F D A L K Y D V K K I E E V V Y D V S I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S S S
S S T T T T T T

. . . .

Sequence G L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	I	F	S	N	Y	Q	K	Y	I	D	N	E	Q	E	V	R	E	N	I	R	I	V	V	R	E	I	E	H	L	S	K	E	A	Q	I	K	L	Q	I	I	H	S	D	L	S	Q	I	S	A	A	C	G	L	A	R	K	Q	V	E	L	C	A	Q	K	Y	Q	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																																						G	G	G	G	T		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	L	V	P	A	G	Q	Y	Y	R	Y	S	D	H	W	T	F	I	T	Q	R	L	I	F	I	I	A	L	V	I	Y	L	E	A	G	F	L	V	T	R	E	T	V	A	E	M	L	G	L	K	I	S	Q	S	E	G	F	H	L	D	V	E	D	Y	L	L	G	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T		G	G	G	S	G	G	G	T																				S	S										T	T	T		B	S	S	T	T	T	S	S	B										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	L	A	S	E	L	S	R	F	A	T	N	S	V	T	M	G	D	Y	E	R	P	L	N	I	S	H	F	I	G	D	L	N	T	G	F	R	L	L	N	L	K	N	D	G	L	R	K	R	F	D	A	L	K	Y	D	V	K	K	I	E	E	V	V	Y	D	V	S	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															T	T		S	S																		S	S				S	S	T	T						T	T																T	T
	.	.	.	.
Sequence	G	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T