Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4depF_

Fold library idPDB HeaderMoleculeTitle
c4depF_PDB header: immune systemChain: F: PDB Molecule: interleukin-1 receptor accessory protein;PDBTitle: structure of the il-1b signaling complex


Added to library: Wed Jan 9 20:00:03 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRDLEELPENRISKEKDVLWFR
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS
TT




TTBTTTBSS

STTSTT

B


B



TT
S

BTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S

GGG

SS



TT


SS


TT
S
SS
TTSS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPGRTFHLTRTLTVKVVGSPKNAVPPV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TT
SS
SSTTS

GGG






GGG

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IHSPNDHVVYELIPCTVYFSFLMDSRNEVWWTIDTINESISHSRTEDETRTQILSDLKRSYVCHARSAKG
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
SS





SS







B
TT



TTS
TT
 .........
Sequence EVAKAAKVK
Predicted secondary structure
SS confidence








Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D