PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4db8B_

Fold library id	PDB Header	Molecule	Title
c4db8B_	PDB header: de novo protein	Chain: B: PDB Molecule: armadillo-repeat protein;	PDBTitle: designed armadillo-repeat protein

Links to external resources
Added to library: Sat May 19 11:46:45 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S E L P Q M T Q Q L N S D D M Q E Q L S A T R K F S Q I L S D G N E Q I Q A V I D A G A L P A L V Q L L S S P N E Q I L Q E A L W A L S N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T T G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S G G N E Q I Q A V I D A G A L P A L V Q L L S S P N E Q I L Q E A L W A L S N I A S G G N E Q I Q A V I D A G A L P A L V Q L L S S P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
T T S
S
T T S
T T G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E Q I L Q E A L W A L S N I A S G G N E Q I Q A V I D A G A L P A L V Q L L S S P N E Q I L Q E A L W A L S N I A S G G N E Q K Q A V K E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
G G G
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence G A L E K L E Q L Q S H E N E K I Q K E A Q E A L E K L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	L	P	Q	M	T	Q	Q	L	N	S	D	D	M	Q	E	Q	L	S	A	T	R	K	F	S	Q	I	L	S	D	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	S	S																													T	T								G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S											T	T								T	T	S		S																T	T	S											T	T								G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I	A	S	G	G	N	E	Q	K	Q	A	V	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S											T	T								G	G	G		S																	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	G	A	L	E	K	L	E	Q	L	Q	S	H	E	N	E	K	I	Q	K	E	A	Q	E	A	L	E	K	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T	S		S															T