PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4da1A_

Fold library id	PDB Header	Molecule	Title
c4da1A_	PDB header: hydrolase	Chain: A: PDB Molecule: protein phosphatase 1k, mitochondrial;	PDBTitle: crystal structure of branched-chain alpha-ketoacid dehydrogenase2 phosphatase with mg (ii) ions at the active site

Links to external resources
Added to library: Sat Feb 11 12:35:13 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I S L E N V G C A S Q I G K R K E N E D R F D F A Q L T D E V L Y F A V Y D G H G G P A A A D F C H T H M E K C I M D L L P K E K N L E T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T S S S
S S S S S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L T L A F L E I D K A F S S H A R L S A D A T L L T S G T T A T V A L L R D G I E L V V A S V G D S R A I L C R K G K P M K L T I D H T P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G G G
T T T S S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R K D E K E R I K K C G G F V A W N Q P H V N G R L A M T R S I G D L D L K T S G V I A E P E T K R I K L H H A D D S F L V L T T D G I N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T
T T T B S
S B
G G G G G G T
B
S S S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . .

Sequence M V N S Q E I C D F V N Q C H D P N E A A H A V T E Q A I Q Y G T E D N S T A V V V P F G A W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	S	L	E	N	V	G	C	A	S	Q	I	G	K	R	K	E	N	E	D	R	F	D	F	A	Q	L	T	D	E	V	L	Y	F	A	V	Y	D	G	H	G	G	P	A	A	A	D	F	C	H	T	H	M	E	K	C	I	M	D	L	L	P	K	E	K	N	L	E	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G								T	T	S	S	S											S	S	S											S	S	T																		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	L	A	F	L	E	I	D	K	A	F	S	S	H	A	R	L	S	A	D	A	T	L	L	T	S	G	T	T	A	T	V	A	L	L	R	D	G	I	E	L	V	V	A	S	V	G	D	S	R	A	I	L	C	R	K	G	K	P	M	K	L	T	I	D	H	T	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S		G	G	G	G	G												T	T	T								S	S								T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	K	D	E	K	E	R	I	K	K	C	G	G	F	V	A	W	N	Q	P	H	V	N	G	R	L	A	M	T	R	S	I	G	D	L	D	L	K	T	S	G	V	I	A	E	P	E	T	K	R	I	K	L	H	H	A	D	D	S	F	L	V	L	T	T	D	G	I	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T											T	T	T	B	S		S	B					G	G	G	G	G	G	T		B												S	S	S													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Sequence	M	V	N	S	Q	E	I	C	D	F	V	N	Q	C	H	D	P	N	E	A	A	H	A	V	T	E	Q	A	I	Q	Y	G	T	E	D	N	S	T	A	V	V	V	P	F	G	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S	S	S																T			S