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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4d9gA_

Fold library idPDB HeaderMoleculeTitle
c4d9gA_PDB header: lyaseChain: A: PDB Molecule: putative diaminopropionate ammonia-lyase;PDBTitle: crystal structure of selenomethionine incorporated holo2 diaminopropionate ammonia lyase from escherichia coli


Added to library: Sat Apr 28 13:30:54 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLALDDLANLFGVKKILVKDESKRFG
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Known secondary structure (DSSP)






TT





GGGSTSTT







T
SGGGSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNAFXLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKXTFATTTDGNHGRGVAWAAQQLGQNAVIYXP
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Known secondary structure (DSSP) TTB

TTTT

GGG



S



SSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KGSAQERVDAILNLGAECIVTDXNYDDTVRLTXQHAQQHGWEVVQDTAWEGYTKIPTWIXQGYATLADEA
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Known secondary structure (DSSP) TT

TTT

SS
T


SS
BTTB
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VEQXREXGVTPTHVLLQAGVGAXAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVTIXAGLA
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Known secondary structure (DSSP) T


S
SSS
SSS
GGG
SS



STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence CGEPNPLGWEILRNCATQFISCQDSVAALGXRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLX
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Known secondary structure (DSSP)
SS




TS
STT






TTTSSTT
 .........360.........370.........380.......
Sequence EKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVA
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Known secondary structure (DSSP) TT

TT

B

SSTT
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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