Fold library entry viewer: c4d8mA_

Added to library: Thu Jan 10 11:07:25 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	D	Q	Q	L	F	N	A	I	M	D	A	V	N	K	M	V	D	N	K	F	L	S	Y	N	L	S	T	L	N	K	T	I	E	G	L	Q	G	N	L	G	L	F	Q	N	A	I	Q	V	A	I	C	Q	G	S	T	P	E	R	F	D	Q	N	C	T	P	C	N	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																																																T	T										T	T	T	S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	P	C	K	D	D	L	D	R	V	A	S	R	F	D	T	A	N	S	Q	F	T	Q	H	L	P	E	F	K	N	P	W	S	D	E	N	S	T	Q	E	F	K	R	T	S	V	E	L	T	L	P	M	Y	T	T	V	A	T	L	H	L	L	L	Y	E	G	Y	I	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																								G	G	G	G	S	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	T	K	W	N	F	H	N	E	Q	Y	L	N	N	L	K	V	E	L	Q	Q	L	I	H	S	Y	S	E	T	V	R	T	S	F	L	Q	F	L	P	T	L	N	N	R	S	K	S	S	V	N	A	Y	N	R	Y	V	R	N	M	T	V	N	C	L	D	I	A	A	T	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S																																				T	T	B																		T					T	T	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	T	F	D	T	H	N	Y	H	Q	G	G	K	L	D	L	T	R	I	I	L	S	D	T	A	G	P	I	E	E	Y	T	T	G	D	K	T	S	G	P	E	H	S	N	I	T	P	N	N	I	L	D	T	P	S	P	T	Y	Q	H	S	F	V	S	V	D	S	I	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		T	T	T		T	T															B		S		S			T	T		S	S		S	S	G	G	G		B				B		G	G	G	S		B	T						B			G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	R	K	E	L	Q	Q	L	D	I	A	T	Y	S	T	N	N	S	N	N	C	H	P	Y	G	L	R	L	S	Y	T	D	G	S	R	Y	D	Y	G	D	N	Q	P	D	F	T	T	S	N	N	N	Y	C	H	N	S	Y	T	A	P	I	T	L	V	N	A	R	H	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S														S	S		S												T	T	S							S	S	S			S	S			S	S	S								S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	A	K	G	S	L	Q	N	V	E	S	L	V	V	S	T	V	N	G	G	S	G	S	C	I	C	D	A	W	I	N	Y	L	R	P	P	Q	T	S	K	N	E	S	R	P	D	Q	K	I	N	V	L	Y	P	I	T	E	T	V	N	K	G	T	G	G	N	L	G	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S												S	S						T	T								S												T	T															T	T		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	A	Y	V	P	M	E	L	V	P	E	N	V	I	G	D	V	N	A	D	T	K	L	P	L	T	Q	L	K	G	F	P	F	E	K	Y	G	S	E	Y	N	N	R	G	I	S	L	V	R	E	W	I	N	G	N	N	A	V	K	L	S	N	S	Q	S	V	G	I	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			S	S						B		T	T	T			B									T	T	S			G	G	G	T	T	S								G	G	G	T								T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	N	Q	T	K	Q	K	Y	E	I	R	C	R	Y	A	S	K	G	D	N	N	V	Y	F	N	V	D	L	S	E	N	P	F	R	N	S	I	S	F	G	S	T	E	S	S	V	V	G	V	Q	G	E	N	G	K	Y	I	L	K	S	I	T	T	V	E	I	P	A	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													S	S											S	S	S												T	T		S	S	S				S	S	S														S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Sequence	F	Y	V	H	I	T	N	Q	G	S	S	D	L	F	L	D	R	I	E	F	V	P	K	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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