Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d77A_

Fold library idPDB HeaderMoleculeTitle
c4d77A_PDB header: signaling proteinChain: A: PDB Molecule: gliomedin;PDBTitle: high-resolution structure of the extracellular olfactomedin2 domain from gliomedin


Added to library: Sat Dec 27 08:20:33 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPMITSIGNPAQVLKVKETFGTWLRESANRSDDRIWVTEHFSGIMVKEFEDLPALLNSSFTLLHLPHYFH
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)






S
SS

S
SS


SSSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GCGHAVYNNSLYYHKGGSNTIVRFEFGKETPQTLKLEDALYFDRKYLFANSKTYFNIAVDEKGLWIIYAS
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
SSTTTTTTTT
TTB

STT

SBGGGTBS

SS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence SVDGSSILVAQLDERTFSVLRHINTTYPKSKAGNAFIAQGILYVTDTKDTRVTFAFDLLRGKQINANFGL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTTS
TTTTGGG
S
TT
TTSSTTTT



 .........220.........230.........240.....
Sequence RMSQSVLAMLSYNMRDQHLYSWEDGHLMLYPVHFS
Predicted secondary structure













SS confidence


































Known secondary structure (DSSP)
S

S
TTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D