Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d56A_

Fold library idPDB HeaderMoleculeTitle
c4d56A_PDB header: hydrolaseChain: A: PDB Molecule: apnaa1;PDBTitle: understanding bi-specificity of a-domains


Added to library: Sat Jul 4 15:26:17 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKQSIHQLFETQVERTPEAVAVLSEQGQLTYEELNTKANQLAHYLRTLGVKSETLVGVCVDRSLEMVIGL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)




TTSTTTT

TT


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAILKAGGAYVPLDPTYPRERLTYMVQDAQISVLVTQTQWSNLISDYQGQVICLDSQWAKIASYSQENLV
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TT


TTS
TT


GGGTT
STT

STTT
TS

S


 .........150.........160.........170.........180.........190.........200.........210
Sequence NTVNPENLAYVIYTSGSTGKPKGVMIEHQSLVNFTKLAIAQYQITTSDRTLQFVSISFDVAAEEIYVTLC
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) S


TTS

TTSS
T

TT

S
TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGATLILRTEEMISSIPSFVQKSQDWQITVWSLPTAYWHLLVNELVKSKIALPDSLRLVIIGGERVQPEL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT


STTTSSTT

TT



TT

SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence VRMWFKNVGNFPELINVYGPTEGTIAVSLCRLSQLTESQRNRTEIPIGKSLGENISVYVLDETLKTVPPE
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) T
S
S

GGGSS
SGGGS
SSSS


BSSTT
TTS
B

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TPGEIYIGGTALARGYLNRPELTAQKFIQDPFSPSERLYKTGDLGRYLADGNLEYLGRVDHQVKINGFRV
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

TT


TT

TTSTT

TTS
SSSTT
 .........430.........440.........450.........460.........470.........480...
Sequence ELGEIETVLLQHHQVAQAVVIDRRLVAYLVPHSTEENLTVTLQQFLKNKLPSYMIPATFVVLY
Predicted secondary structure





















SS confidence






























































Known secondary structure (DSSP) TSTT
S


SS

TTTTS
GGGS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D