Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d47D_

Fold library idPDB HeaderMoleculeTitle
c4d47D_PDB header: transferaseChain: D: PDB Molecule: levansucrase;PDBTitle: x-ray structure of the levansucrase from erwinia amylovora


Added to library: Sat Aug 8 08:25:43 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YNYKPTLWTRADALKVHEDDPTTTQPVIDIAFPVMSEEVFIWDTMPLRDFDGEIISVNGWCIIFTLTADR
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)






T

TT
TTSB




TT


S
SS
B
TT

BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NTDNPQFQDENGNYDITRDWEDRHGRARICYWYSRTGKDWIFGGRVMAEGVSPTTREWAGTPILLNDRGD
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
TT
GGGB
TTS
B
TGGGG
SSSSS
SS
TT
SSSS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDLYYTCVTPGATIAKVRGKIVTSDQSVSLEGFQQVTSLFSADGTIYQTEEQNAFWNFRDPSPFIDRNDG
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) SSS
SS


SSSB

TTT
TT



TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLYMLFEGNVAGPRGSHEITQAEMGNVPPGYEDVGGAKYQAGCVGLAVAKDLSGSEWQILPPLITAVGVN
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)
BSSSTT





S

TT



TTGGG

SSTT

S
TTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence DQTERPHFVFQDGKYYLFTISHKYTFADNLTGPDGVYGFVSDKLTGPYTPMNSSGLVLGNPSSQPFQTYS
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) S

TT
GGGB
TT



SSSTT


GGGTS

TTSTTS
 .........360.........370.........380.........390.........400.........410.
Sequence HYVMPNGLVTSFIDSVPWKGKDYRIGGTEAPTVKILLKGDRSFIVDSFDYGYIPAMKDITL
Predicted secondary structure




































SS confidence




























































Known secondary structure (DSSP)
TTS
STT

TTT



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D