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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d2iB_

Fold library idPDB HeaderMoleculeTitle
c4d2iB_PDB header: hydrolaseChain: B: PDB Molecule: hera;PDBTitle: crystal structure of the hera hexameric dna translocase2 from sulfolobus solfataricus bound to amp-pnp


Added to library: Sat Dec 6 08:27:34 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPLLDDNMNDIEIVQRLKQFNN
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Known secondary structure (DSSP)

SSSS


TT
TT
SSS
TT


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SIPVYTKAKVKLLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSF
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Known secondary structure (DSSP)



TTTTTB

SS


TT


TTT

SSS


SGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence ARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPKLNPLYMTPREFSTLL
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Known secondary structure (DSSP) GG

STTSSTT

SSSTTTTS

TT


B
GGG

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EIRENAIIQYRILRRAFIKVTNGIRAALLNSQFYELMADALSAKDEVLNKFEEFMDRYSNVIDLTSSDII
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Known secondary structure (DSSP) T
STT




TTTTB
SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence EKVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLT
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Known secondary structure (DSSP)

TTS
TT

SSSS

S
TTGGGT

SSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence KYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSS
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Known secondary structure (DSSP) TS
GGGS
TT






TT
SS

TTGGG
 .........430.........440.........450........
Sequence LDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGE
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Known secondary structure (DSSP)

TTSTTSSS



SS



SS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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