PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4d18G_

Fold library id	PDB Header	Molecule	Title
c4d18G_	PDB header: signaling protein	Chain: G: PDB Molecule: cop9 signalosome complex subunit 7a;	PDBTitle: crystal structure of the cop9 signalosome

Links to external resources
Added to library: Sat Jul 26 09:04:29 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T G Q N Q E Q F L L L A K S A K G A A L A T L I H Q V L E A P G V Y V F G E L L D M P N V R E L A E S D F A S T F R L L T V F A Y G T Y A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S T T
T
T T T T S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y L A E A R N L P P L T E A Q K N K L R H L S V V T L A A K V K C I P Y A V L L E A L A L R N V R Q L E D L V I E A V Y A D V L R G S L D Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
S T
S S T T S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence R N Q R L E V D Y S I G R D I Q R Q D L S A I A R T L Q E W C V G C E V V L S G I E E Q V S R A N Q H K E Q Q L G L K Q Q I E S E V A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	G	Q	N	Q	E	Q	F	L	L	L	A	K	S	A	K	G	A	A	L	A	T	L	I	H	Q	V	L	E	A	P	G	V	Y	V	F	G	E	L	L	D	M	P	N	V	R	E	L	A	E	S	D	F	A	S	T	F	R	L	L	T	V	F	A	Y	G	T	Y	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T														T	T	S	T	T									T						T	T	T	T	S	T	T												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	A	E	A	R	N	L	P	P	L	T	E	A	Q	K	N	K	L	R	H	L	S	V	V	T	L	A	A	K	V	K	C	I	P	Y	A	V	L	L	E	A	L	A	L	R	N	V	R	Q	L	E	D	L	V	I	E	A	V	Y	A	D	V	L	R	G	S	L	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	S																								S												T		S	S														T	T	S							T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	R	N	Q	R	L	E	V	D	Y	S	I	G	R	D	I	Q	R	Q	D	L	S	A	I	A	R	T	L	Q	E	W	C	V	G	C	E	V	V	L	S	G	I	E	E	Q	V	S	R	A	N	Q	H	K	E	Q	Q	L	G	L	K	Q	Q	I	E	S	E	V	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T														S	S	T	T																																														T	T