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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d10C_

Fold library idPDB HeaderMoleculeTitle
c4d10C_PDB header: signaling proteinChain: C: PDB Molecule: cop9 signalosome complex subunit 3;PDBTitle: crystal structure of the cop9 signalosome


Added to library: Sat Jul 26 08:18:57 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVP
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Known secondary structure (DSSP)

TTSS

TTSS

TTTT

SSSSTTTSS
SSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIH
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Known secondary structure (DSSP) TTT


STTTTSSS

SS
SS



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTP
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Known secondary structure (DSSP) TT

GGGGGGTSS


S


SSS


TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKH
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Known secondary structure (DSSP)
SS

SSS




TTS
TTTTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASIN
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Known secondary structure (DSSP) TT
TTTTTTT
ST
SSTTS

 .........360.........370.........380.........390.........400.
Sequence QKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF
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Known secondary structure (DSSP) TTTT





S
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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