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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d0nB_

Fold library idPDB HeaderMoleculeTitle
c4d0nB_PDB header: cell cycleChain: B: PDB Molecule: a-kinase anchor protein 13;PDBTitle: akap13 (akap-lbc) rhogef domain in complex with rhoa


Added to library: Sat May 24 08:34:00 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMSKQLEAESWSRIIDSKFLKQQKKDVVKRQEVIYELMQTEFHHVRTLKIMSGVYSQGMMADLLFEQQMV
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Known secondary structure (DSSP)
TTSSSS
TS
TS


 .........80.........90.........100.........110.........120.........130.........140
Sequence EKLFPCLDELISIHSQFFQRILERKKESLVDKSEKNFLIKRIGDVLVNQFSGENAERLKKTYGKFCGQHN
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Known secondary structure (DSSP) STTTTB
TT
SS
B

S

TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSVNYFKDLYAKDKRFQAFVKKKMSSSVVRRLGIPECILLVTQRITKYPVLFQRILQCTKDNEVEQEDLA
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Known secondary structure (DSSP)
TS
GGGSGGG

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKEDLKRKKLVRDGSVFLKNAAG
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Known secondary structure (DSSP) B
TT

TTS
GGGSTT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHA
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Known secondary structure (DSSP)
SSTT

STT

S
TT
TT
TT
SSSS


 .........360.........370.
Sequence SSKEERNSWIQIIQDTINTLN
Predicted secondary structure



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Known secondary structure (DSSP) SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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