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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d05A_

Fold library idPDB HeaderMoleculeTitle
c4d05A_PDB header: ligaseChain: A: PDB Molecule: atp-dependent dna ligase;PDBTitle: structure and activity of a minimal-type atp-dependent dna2 ligase from a psychrotolernt bacterium


Added to library: Sat Nov 15 08:14:58 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GQPPPIQLATNYRQDIDVTQYYVSEKLDGIRAYWNGHQLISKQGNIFTAPTWFIASFPTTAXDGELWIAR
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Known secondary structure (DSSP)








TTS
GGG

S
SS

TTS
B



TT

SS

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence QQFETVSGIARTQDNQNEQWKQIKFXIFDLPKSTVSFEQRINKXQTLVTDTNSPYLQXIEQQKIPNTVAL
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Known secondary structure (DSSP) T
T


TT
GGGGG

TT

S


TT


B

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FDLLNKVVXGKGEGLXLHHQDALYQTKRSRDLXKLKKFEDAEATVIAYLPGKGKYEGLLGAILVKNEEGV
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Known secondary structure (DSSP) TT

TT



SS
S
B
GGGBTSTTS
 .........220.........230.........240.........250........
Sequence TFKIGSGFSDEERSTPPPIGSLITYRFTGKTNNNIPRFASFVRIRVIY
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Known secondary structure (DSSP)
SS

S


TT

SB
GGG
BTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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